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CAZyme Gene Cluster: NC_000913.3|CGC54

CGC gene composition diagram | Gene composition table | Substrate predicted by dbCAN-sub | Substrate predicted by dbCAN-PUL search | Filtered homologs of dbCAN-PUL hits

CGC gene composition diagram

Gene detail information of NC_000913.3_3608

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3608
Location and strand information: 3853922 - 3855106 (+)
Family: 2.A.1.2.9
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3609

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3609
Location and strand information: 3855114 - 3855611 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3610

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3610
Location and strand information: 3855608 - 3855970 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3611

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3611
Location and strand information: 3855960 - 3856307 (-)
Family: 9.B.51.1.1
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3612

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3612
Location and strand information: 3856415 - 3856864 (+)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3613

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3613
Location and strand information: 3856911 - 3858404 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3614

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3614
Location and strand information: 3858401 - 3860116 (-)
Family: 2.A.21.3.21
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3615

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3615
Location and strand information: 3860283 - 3861176 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3616

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3616
Location and strand information: 3861173 - 3861349 (-)
Family: null
Protein type: null
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3617

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3617
Location and strand information: 3861349 - 3861987 (-)
Family: GH4|GH4_e4
Protein type: CAZyme
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3618

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3618
Location and strand information: 3861987 - 3862472 (-)
Family: 4.A.1.1.10
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3619

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3619
Location and strand information: 3862497 - 3863603 (-)
Family: 4.A.1.1.10
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3620

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3620
Location and strand information: 3863899 - 3864615 (+)
Family: GntR
Protein type: TF
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene detail information of NC_000913.3_3621

Gene clsuter ID: NC_000913.3|CGC54
Gene ID: NC_000913.3_3621
Location and strand information: 3864612 - 3866273 (-)
Family: 2.A.81.1.5
Protein type: TC
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene composition table

Protein ID	Type	Start	End	Strand	Signature
NC_000913.3_3608	TC	3853922	3855106	+	2.A.1.2.9
NC_000913.3_3609	null	3855114	3855611	-
NC_000913.3_3610	null	3855608	3855970	-
NC_000913.3_3611	TC	3855960	3856307	-	9.B.51.1.1
NC_000913.3_3612	null	3856415	3856864	+
NC_000913.3_3613	null	3856911	3858404	-
NC_000913.3_3614	TC	3858401	3860116	-	2.A.21.3.21
NC_000913.3_3615	TF	3860283	3861176	+	HTH_AraC+HTH_AraC
NC_000913.3_3616	null	3861173	3861349	-
NC_000913.3_3617	CAZyme	3861349	3861987	-	GH4\|GH4_e4
NC_000913.3_3618	TC	3861987	3862472	-	4.A.1.1.10
NC_000913.3_3619	TC	3862497	3863603	-	4.A.1.1.10
NC_000913.3_3620	TF	3863899	3864615	+	GntR
NC_000913.3_3621	TC	3864612	3866273	-	2.A.81.1.5